vitri 9 precursor(245) Nucleic Acid Card

General Information
Name vitri 9 precursor
Sequence TTTTTTTTTTTTTTTTTTTTAAGTAACACATATGAACTCC
ATTCATTCAATTATTCAAGTGGAAACTGGAAAAGGAAATA
CATGAGAAAAGGCATGCTTGAGTGTAGTCACACAGCATCT
TTAGCCTTCTCTTCAATTCAAAACAAAATAAAACAACAAT
TACTTATAACTTAAATCCAACCGATACTCGCTCATAGTCC
AGCTTCATCTCAATTAGATAGAGGTGAGAGCATTTTTGTT
GTTGCTGTTTGATAGAGAATTTTGACCGTAGCATAAGGCC
CAGCTACCGCAAGAACAACCAGGAGTGTAGCATTTACCAA
GTAAACAAGTTTCACCACAATCGAAAATGGTNNCACCGTA
GCATAAGCCCCAGTTACCGCAAGCACAACCAGGAGTGTAG
CATTTTCCAAGTAAACAACTTTCACCACAGTCGAAAATGG
TACCACCGCCAAGTTTGTTAGAGTGGGCAACCAAAGCTTC
TTCAAGAACTGGGTTTGAGACGATGGTTTTAGCCATTATA
ATGCCCTTGATGGCACCACTTTTAACAAGATTCTCGTGCG
CGTCACGAGTGATGATATCTTTCACTTCCTTATTGTTGTT
GCTGTTTGATAGAGAATTTTGACCGTAGCATAAGGCCCAG
CTACCGCAAGAACAACCAGGAGTGTAGCATTTACCAAGTA
AACAAGTTTCACCACAATCGAAAATGGTACCACTGCCAAG
TTTGTGGTTGAAGTGAGCAGCCAGAGCTTCTTCAAGGATT
GGATTTGATATGATAGTTTTGGTCATAGTAATGCTTTGAA
TGGCACCGCTGCTTACGAGCTTCTCATATGCTCCACGAGT
GATGACATCTTTAGTAGATGCAAAGGCTGAAGGGAGAGCG
AAAGCTGCTACAAGCACCACAACAAGACCAACCACCATCT
TCATCTTCTTTGTACGATCACTGAGAATATAAAGATGTTT
GTATTGCT
Notes >scaffold-LPGY-2032436-Viola_tricolor. N = Manual insertion of ambiguous base. X = Resulting ambiguous amino acids (Hellinger et al, 2015).
Sequence translation MKMVVGLVVVLVAAFALPSAFASTKDVITRGAYEKLVSSG
AIQSITMTKTIISNPILEEALAAHFNHKLGSGTIFDCGET
CLLGKCYTPGCSCGSWALCYGQNSLSNSNNNKEVKDIITR
DAHENLVKSGAIKGIIMAKTIVSNPVLEEALVAHSNKLGG
GTIFDCGESCLLGKCYTPGCACGNWGLCYGXTIFDCGETC
LLGKCYTPGCSCGSWALCYGQNSLSNSNNKNALTSI*
Organism Viola tricolor

References
Hellinger,R., Koehbach,J., Soltis,D.E., Carpenter,E.J., Wong,G.K. and Gruber,C.W. (2015) Peptidomics of Circular Cysteine-Rich Plant Peptides: Analysis of the Diversity of Cyclotides from Viola tricolor by Transcriptome and Proteome Mining. J. Proteome Res. 14:4851-4862

Cross-references
Proteins Encoded vitri 9 precursor
Links