caripe 5(809) Protein Card

General Information
Name caripe 5
Sequence XCGESCVFIPCFTSVFGCSCKDKVCYRN
Class Cyclotide
Technique NGS
Average Mass 2972.45
Monoisotopic Mass 2970.21
m/z M+H 2972.45
ProteinType Partial sequence
Parent
Organism Carapichea ipecacuanha
Notes The sequence presented on this card differs from the one published by Koehbach et al. by one residue: an additional phenylalanine at position 16. Koehbach et al. state that they extracted this sequence from the 1KP project from the BQEQ sequencing, but a blast alignment retrieve only the sequence displayed here, suggesting that the sequence in Koehbach et al. is erroneous.
Cyclic Yes

Assay
No assays found

References
Koehbach,J., Attah,A.F., Berger,A., Hellinger,R., Kutchan,T.M., Carpenter,E.J., Rolf,M., Sonibare,M.A., Moody,J.O., Wong,G.K., Dessein,S., Greger,H. and Gruber,C.W. (2013) Cyclotide discovery in Gentianales revisited-identification and characterization of cyclic cystine-knot peptides and their phylogenetic distribution in Rubiaceae plants. Biopolymers 100:438-452

Cross-references
Protein precursor(s) caripe 5 precursor [partial]
Nucleic acids
Structure
Links

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